Doug Senalik's Blog — Things that aren't on the internet yet

October 2, 2010

⚙ Installing Roche 454 Analysis software (gsAssembler and gsMapper) on Fedora 13

☷ October 2, 2010 ☷

In case it helps anyone else, to install the Roche 454 sequence analysis software on a computer running 64 bit Fedora 13, there were a few libraries that needed to be installed first:

glibc.i686 zlib.i686 libXi.i686 libXtst.i686 libXaw.i686

Roche software version was 2.3

So these two commands took care of that (I could have combined them into one of course):

$ sudo yum install glibc.i686
Installed:
  glibc.i686 0:2.12-3

Dependency Installed:
  nss-softokn-freebl.i686 0:3.12.6-3.fc13

Dependency Updated:
  glibc.x86_64 0:2.12-3
  glibc-common.x86_64 0:2.12-3
  glibc-devel.x86_64 0:2.12-3
  glibc-headers.x86_64 0:2.12-3

$ sudo yum install zlib.i686 libXi.i686 libXtst.i686 libXaw.i686
Installed:
  libXaw.i686 0:1.0.6-4.fc12
  libXi.i686 0:1.3-2.fc13
  libXtst.i686 0:1.0.99.2-3.fc12
  zlib.i686 0:1.2.3-23.fc12

Dependency Installed:
  libICE.i686 0:1.0.6-2.fc13
  libSM.i686 0:1.1.0-7.fc12
  libX11.i686 0:1.3.1-3.fc13
  libXau.i686 0:1.0.5-1.fc12
  libXext.i686 0:1.1.2-2.fc13
  libXmu.i686 0:1.0.5-2.fc13
  libXpm.i686 0:3.5.8-2.fc13
  libXt.i686 0:1.0.7-1.fc13
  libuuid.i686 0:2.17.2-7.fc13
  libxcb.i686 0:1.5-1.fc13

Dependency Updated:
  libblkid.x86_64 0:2.17.2-7.fc13
  libuuid.x86_64 0:2.17.2-7.fc13
  util-linux-ng.x86_64 0:2.17.2-7.fc13

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