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Spidey Home
mRNA 1: gi|5924380|gb|AF184273.1| Daucus carota leucoanthocyanidin dioxygenase (LDOX1) mRNA, LDOX1-1 allele, complete cds
mRNA 2: gi|5924382|gb|AF184274.1| Daucus carota leucoanthocyanidin dioxygenase 2 (LDOX) mRNA, LDOX-2 allele, complete cds
Jump to multiple alignment
| 136 | 1655 |
| Genomic |  |
| mRNA 1 |   |
| mRNA 2 | |
|
Genomic: lcl|Carrot Genomic sequence |
|
mRNA: gi|5924380|gb|AF184273.1| Daucus carota leucoanthocyanidin dioxygenase (LDOX1) mRNA, LDOX1-1 allele, complete cds |
Alignment is on plus strand of genomic sequence and on plus strand of mRNA sequence
mRNA coverage: 100%
Overall percent identity: 95.9%
Non-aligning poly(A) tail: 22
|
| EXON |
Genomic coordinates |
mRNA coordinates |
length |
identity |
mismatches |
gaps |
Donor site |
Acc. site |
|
Exon 1 |
136-691 |
1-556 |
556 |
94.8% |
29 |
0 |
d |
 |
|
Exon 2 |
777-1645 |
557-1426 |
870 |
96.7% |
29 |
1 |
|
a |
Jump to next
Exon 1: 136-691 (genomic); 1-556 (mRNA)
|
136 TCACCTCAAGCTTCAATTTCAGAAATAAACACAGAGCACATACTAAATCA
||||| ||||||||||||||||||||||||||||||||
1 CTTCATTTTCAGAAATAAACACAGAGCACATACTAAATTG
176 CGATGGTCGCGACTACCTTAGAATCTCCAAGAGTAGAGACCCTGGCTGGG
||||||| || ||||||||||||||||||||||| |||||||||||||||
41 CGATGGTGGCAACTACCTTAGAATCTCCAAGAGTTGAGACCCTGGCTGGG
M V A T T L E S P R V E T L A G
226 AGTGGCATTCAGCTAATCCCGAAAGAATACGTGAGGCCGAAAGATGAACT
|||||||||||||||||||| ||||||||||||||||| |||||||||||
91 AGTGGCATTCAGCTAATCCCAAAAGAATACGTGAGGCCTAAAGATGAACT
S G I Q L I P K E Y V R P K D E L
276 TGTCAGCATCACCAACATTTTCGAGGAGGAAAAGAGTGATGAAGGCCCTC
| ||||||||||||||||||||||||||||||||||||||||||||||||
141 TATCAGCATCACCAACATTTTCGAGGAGGAAAAGAGTGATGAAGGCCCTC
I S I T N I F E E E K S D E G P
326 AGGTGCCCACAGTCGACATAGCTGATATTCTGTCTGATGACAGAGCTGTC
||||||||||||||||||||||||||||||| ||||| |||| ||||||
191 AGGTGCCCACAGTCGACATAGCTGATATTCTTTCTGAGGACAAAGCTGTT
Q V P T V D I A D I L S E D K A V
376 AGGGAGAAATGCTATGAAAGAATTAAGGATGCTGCCGTGGACTGGGGAGT
||||||||||||||||||||||| ||||||||||| ||||| ||||||||
241 AGGGAGAAATGCTATGAAAGAATCAAGGATGCTGCTGTGGAATGGGGAGT
R E K C Y E R I K D A A V E W G V
426 CATGCACCTTGTTAACCACGGGATCTCAAATGAGCTCATGGATCGTGTTA
||||||||| |||||||||||||| ||||||||||||||||| |||||||
291 CATGCACCTAGTTAACCACGGGATTTCAAATGAGCTCATGGACCGTGTTA
M H L V N H G I S N E L M D R V
476 GAGTGGCTGGACAGGCGTTTTTTGCTGAACCAATTGGCGAGAAGGAGAAG
||||||||||||||||||||||||||||||||||||||||||||||||||
341 GAGTGGCTGGACAGGCGTTTTTTGCTGAACCAATTGGCGAGAAGGAGAAG
R V A G Q A F F A E P I G E K E K
526 TATGCAAATGATCCGGGCACTGGAATGATTCAAGGGTATGGAAGCAAGCT
|||||||||||||| ||||| ||||||||||||||||||||||| |||||
391 TATGCAAATGATCCAGGCACCGGAATGATTCAAGGGTATGGAAGTAAGCT
Y A N D P G T G M I Q G Y G S K L
576 AGCCAACAATGCCAGCGGCCAGCTTGAGTGGGAAGACTATTTCTTCCACC
|||||||||||| |||||||||||||||||||||||||||||||||||||
441 AGCCAACAATGCTAGCGGCCAGCTTGAGTGGGAAGACTATTTCTTCCACC
A N N A S G Q L E W E D Y F F H
626 TTGTTTACCCCGAAGAGAAAGCTGATTTGTCTATTTGGCCTAAGAAACCA
||||||||||||| |||||||||||||||||||| |||||||||| ||||
491 TTGTTTACCCCGAGGAGAAAGCTGATTTGTCTATCTGGCCTAAGAGACCA
L V Y P E E K A D L S I W P K R P
676 CAGGACTACATGTAAGTCGCCACAAA
||||||||||| ||
541 CAGGACTACATTCCAG
Q D Y I P
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Exon 2: 777-1645 (genomic); 557-1426 (mRNA)
|
777 TGCAGTCCGGCAACAAGGGAGTACGCGAAGGAGTTAAGAGGCCTCGCGAC
|||||||||||||||||||||||||||||||||| |||||
557 CAACAAGGGAGTACGCGAAGGAGTTAAGAGGCCTAGCGAC
A T R E Y A K E L R G L A T
817 AAAGTTACTATCTGCATTATCTATAGGACTGGGACTTGAAGAAGGAAGGC
||||||||| |||||||||||| | |||||||||||||||||||||||||
597 AAAGTTACTGTCTGCATTATCTTTCGGACTGGGACTTGAAGAAGGAAGGC
K L L S A L S F G L G L E E G R
867 TAGAAAAAGAAGTTGGCGGAATGGAAGAGCTAATACTCCAGATGAAGATC
|||||||||||||||| |||||||||||||| |||||||| |||||||||
647 TAGAAAAAGAAGTTGGTGGAATGGAAGAGCTGATACTCCAAATGAAGATC
L E K E V G G M E E L I L Q M K I
917 AATTACTACCCGAAGTGTCCTCAACCTGAACTGGCTCTCGGTGTTGAAGC
||||||||||| |||||||||||||||||||||||||| || ||||||||
697 AATTACTACCCCAAGTGTCCTCAACCTGAACTGGCTCTTGGAGTTGAAGC
N Y Y P K C P Q P E L A L G V E A
967 TCACACTGATGTGAGTGCACTCAGTTTCATACTCCATAATATGGTTCCTG
||||||||||||||||||||||||||||||||||||||||| ||| ||||
747 TCACACTGATGTGAGTGCACTCAGTTTCATACTCCATAATACGGTGCCTG
H T D V S A L S F I L H N T V P
1017 GGCTACAACTCTTCTATGGAGGCAAGTGGGTGACCGCTAAATGTGTTCCA
||||||||||||||||||||||||||||||||||||||||||||||||||
797 GGCTACAACTCTTCTATGGAGGCAAGTGGGTGACCGCTAAATGTGTTCCA
G L Q L F Y G G K W V T A K C V P
1067 GACTCTATTATAGTACACATTGGGGACACACTTGAAATTTTAAGCAATGG
||||||||||||||||||||||||||||||||||||||||||||||||||
847 GACTCTATTATAGTACACATTGGGGACACACTTGAAATTTTAAGCAATGG
D S I I V H I G D T L E I L S N G
1117 CAAGTATAAAAGCATTCTTCACAGGGGACTTGTGAACAAGGAGAAAGTTA
|||||||||||||||||||||||||||||||||||||||||| |||||||
897 CAAGTATAAAAGCATTCTTCACAGGGGACTTGTGAACAAGGAAAAAGTTA
K Y K S I L H R G L V N K E K V
1167 GAATTTCGTGGGCTGTTTTCTGTGAGCCTCCTAAAGAGAAGATTATTCTA
||||||||||||||||||||||||||||||| ||||||||||||||||||
947 GAATTTCGTGGGCTGTTTTCTGTGAGCCTCCGAAAGAGAAGATTATTCTA
R I S W A V F C E P P K E K I I L
1217 AAGCCACTGCCAGAGACAGTAACTGAGGCTGAGCCACCGCTCTTTCCACC
||||| ||||||||||| ||||||||||||||||||||||||||||||||
997 AAGCCGCTGCCAGAGACGGTAACTGAGGCTGAGCCACCGCTCTTTCCACC
K P L P E T V T E A E P P L F P P
1267 CCGTACCTTTGCTCAGCATATGGCACACAAGCTGTTCAGGAAGAGCCAGG
||||||||||||||||||||||||||||||||||||||||||||||||||
1047 CCGTACCTTTGCTCAGCATATGGCACACAAGCTGTTCAGGAAGAGCCAGG
R T F A Q H M A H K L F R K S Q
1317 AAGCTATTGATGACTCGAAAAAGGTTCAGCCACAGGAACAAAATAATGCT
|||||||||||||||||||||||||||||||||||||||| |||||||||
1097 AAGCTATTGATGACTCGAAAAAGGTTCAGCCACAGGAACAGAATAATGCT
E A I D D S K K V Q P Q E Q N N A
1367 GAAACTGATATTCCTCAGCCAGAAGAACAACAAAAAACCGTAGAAAGTAA
||||||||||||||||||||||||||||||||||| |||| |||||||||
1147 GAAACTGATATTCCTCAGCCAGAAGAACAACAAAAGACCGAAGAAAGTAA
E T D I P Q P E E Q Q K T E E S N
1417 ACCTCAGAAAATTGAAATATTAAAGCCTGGAGAAGAGGCATCTACTTCTC
||||||||||||||||||||||||||||||||||||||||||| |||||
1197 TCCTCAGAAAATTGAAATATTAAAGCCTGGAGAAGAGGCATCTAGTTCTC
P Q K I E I L K P G E E A S S S
1467 CATAATTTGAAATTTCTCAGCTGCTGGAACAGAATAACTATCCTCTAAAA
||||||||||||||||||||||||| ||||||||||||||||||||||||
1247 CATAATTTGAAATTTCTCAGCTGCTAGAACAGAATAACTATCCTCTAAAA
P *
1517 GTAGATATCCGAATCCTTCTATCAAGAGTTGATTTGTCACAGGCTTCAGA
|||||||||||||||||||||||||||||| |||||||||||||||||||
1297 GTAGATATCCGAATCCTTCTATCAAGAGTTAATTTGTCACAGGCTTCAGA
1567 CATTACTATCTCAGTTGCCACATGTTTGAAATATGTTAAATAACC-TTGT
|||| |||||| ||||||| ||||||||||||||||||||||||| ||||
1347 CATTGCTATCTTAGTTGCCTCATGTTTGAAATATGTTAAATAACCTTTGT
1616 TGCAATATATTCAAGTATTGGTTTCTATAATAAATTATGA
||||||||||||| ||||||||||| ||||
1397 TGCAATATATTCATGTATTGGTTTCCATAA
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Genomic: lcl|Carrot Genomic sequence |
|
mRNA: gi|5924382|gb|AF184274.1| Daucus carota leucoanthocyanidin dioxygenase 2 (LDOX) mRNA, LDOX-2 allele, complete cds |
Alignment is on plus strand of genomic sequence and on plus strand of mRNA sequence
mRNA coverage: 93%
Overall percent identity: 96.0%
Non-aligning poly(A) tail: 18
|
| EXON |
Genomic coordinates |
mRNA coordinates |
length |
identity |
mismatches |
gaps |
Donor site |
Acc. site |
|
Exon 1 |
136-691 |
1-556 |
556 |
94.6% |
30 |
0 |
d |
|
|
Exon 2 |
777-1655 |
557-1436 |
880 |
96.8% |
28 |
1 |
|
a |
Exon 1: 136-691 (genomic); 1-556 (mRNA)
|
136 TCACCTCAAGCTTCAATTTCAGAAATAAACACAGAGCACATACTAAATCA
||||| |||||||||||||||||||||| ||||||||||
1 CTTCATTTTCAGAAATAAACACAGAGCAGATACTAAATCG
176 CGATGGTCGCGACTACCTTAGAATCTCCAAGAGTAGAGACCCTGGCTGGG
||||||| || ||||||||||||||||| |||||||||||||||||||||
41 CGATGGTGGCAACTACCTTAGAATCTCCGAGAGTAGAGACCCTGGCTGGG
M V A T T L E S P R V E T L A G
226 AGTGGCATTCAGCTAATCCCGAAAGAATACGTGAGGCCGAAAGATGAACT
|||||||||||||||||||| |||||||||||||||||||||||||||||
91 AGTGGCATTCAGCTAATCCCCAAAGAATACGTGAGGCCGAAAGATGAACT
S G I Q L I P K E Y V R P K D E L
276 TGTCAGCATCACCAACATTTTCGAGGAGGAAAAGAGTGATGAAGGCCCTC
||||||||||||||||||||||||||||||||||||||||||||||||
141 CATCAGCATCACCAACATTTTCGAGGAGGAAAAGAGTGATGAAGGCCCTC
I S I T N I F E E E K S D E G P
326 AGGTGCCCACAGTCGACATAGCTGATATTCTGTCTGATGACAGAGCTGTC
|||||||||||||||||||||||||||||||||||||||||| ||| ||
191 AGGTGCCCACAGTCGACATAGCTGATATTCTGTCTGATGACAAAGCGGTT
Q V P T V D I A D I L S D D K A V
376 AGGGAGAAATGCTATGAAAGAATTAAGGATGCTGCCGTGGACTGGGGAGT
||||||||||||||||||||||| ||||||||||||||||||||||||||
241 AGGGAGAAATGCTATGAAAGAATCAAGGATGCTGCCGTGGACTGGGGAGT
R E K C Y E R I K D A A V D W G V
426 CATGCACCTTGTTAACCACGGGATCTCAAATGAGCTCATGGATCGTGTTA
||||||||| |||||||||||||||||||| |||||||||||||||||||
291 CATGCACCTCGTTAACCACGGGATCTCAAACGAGCTCATGGATCGTGTTA
M H L V N H G I S N E L M D R V
476 GAGTGGCTGGACAGGCGTTTTTTGCTGAACCAATTGGCGAGAAGGAGAAG
||||||||||||||||||||||||||||||| ||||| ||||||||||||
341 GAGTGGCTGGACAGGCGTTTTTTGCTGAACCGATTGGTGAGAAGGAGAAG
R V A G Q A F F A E P I G E K E K
526 TATGCAAATGATCCGGGCACTGGAATGATTCAAGGGTATGGAAGCAAGCT
|||||||||||||| ||||| || |||||||| |||||||||||||||||
391 TATGCAAATGATCCAGGCACCGGTATGATTCAGGGGTATGGAAGCAAGCT
Y A N D P G T G M I Q G Y G S K L
576 AGCCAACAATGCCAGCGGCCAGCTTGAGTGGGAAGACTATTTCTTCCACC
||| |||||||| |||||||||||||||||||||||||||||||||||||
441 AGCAAACAATGCTAGCGGCCAGCTTGAGTGGGAAGACTATTTCTTCCACC
A N N A S G Q L E W E D Y F F H
626 TTGTTTACCCCGAAGAGAAAGCTGATTTGTCTATTTGGCCTAAGAAACCA
|||||||||| || |||||||| |||||||||||||||||||||| ||||
491 TTGTTTACCCTGAGGAGAAAGCCGATTTGTCTATTTGGCCTAAGAGACCA
L V Y P E E K A D L S I W P K R P
676 CAGGACTACATGTAAGTCGCCACAAA
||||||||||| ||
541 CAGGACTACATTCCAG
Q D Y I P
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Exon 2: 777-1655 (genomic); 557-1436 (mRNA)
|
777 TGCAGTCCGGCAACAAGGGAGTACGCGAAGGAGTTAAGAGGCCTCGCGAC
||||||||||||||||||||||||||||||||||||||||
557 CAACAAGGGAGTACGCGAAGGAGTTAAGAGGCCTCGCGAC
A T R E Y A K E L R G L A T
817 AAAGTTACTATCTGCATTATCTATAGGACTGGGACTTGAAGAAGGAAGGC
|||||||||||||||||||||| | |||||||||||||||||||||||||
597 AAAGTTACTATCTGCATTATCTTTCGGACTGGGACTTGAAGAAGGAAGGC
K L L S A L S F G L G L E E G R
867 TAGAAAAAGAAGTTGGCGGAATGGAAGAGCTAATACTCCAGATGAAGATC
||||||||||||||||||||||||||||||||||||||||||||||||||
647 TAGAAAAAGAAGTTGGCGGAATGGAAGAGCTAATACTCCAGATGAAGATC
L E K E V G G M E E L I L Q M K I
917 AATTACTACCCGAAGTGTCCTCAACCTGAACTGGCTCTCGGTGTTGAAGC
|||||||||||||||||||||||||||||||||||||| |||||||||||
697 AATTACTACCCGAAGTGTCCTCAACCTGAACTGGCTCTTGGTGTTGAAGC
N Y Y P K C P Q P E L A L G V E A
967 TCACACTGATGTGAGTGCACTCAGTTTCATACTCCATAATATGGTTCCTG
||||||||||||||||||||||||||||||||||||||||||||| ||||
747 TCACACTGATGTGAGTGCACTCAGTTTCATACTCCATAATATGGTGCCTG
H T D V S A L S F I L H N M V P
1017 GGCTACAACTCTTCTATGGAGGCAAGTGGGTGACCGCTAAATGTGTTCCA
| |||||||| || ||||||||||||||||||||||| ||||||||||||
797 GTCTACAACTGTTTTATGGAGGCAAGTGGGTGACCGCAAAATGTGTTCCA
G L Q L F Y G G K W V T A K C V P
1067 GACTCTATTATAGTACACATTGGGGACACACTTGAAATTTTAAGCAATGG
|||||||||||||||||||||||||| ||||| |||||||||||||||||
847 GACTCTATTATAGTACACATTGGGGATACACTAGAAATTTTAAGCAATGG
D S I I V H I G D T L E I L S N G
1117 CAAGTATAAAAGCATTCTTCACAGGGGACTTGTGAACAAGGAGAAAGTTA
|||||||||||||||||||||||||||||||||||||||||| |||||||
897 CAAGTATAAAAGCATTCTTCACAGGGGACTTGTGAACAAGGAAAAAGTTA
K Y K S I L H R G L V N K E K V
1167 GAATTTCGTGGGCTGTTTTCTGTGAGCCTCCTAAAGAGAAGATTATTCTA
||||||||||||||||||||||||||||||| ||||||||||| ||||||
947 GAATTTCGTGGGCTGTTTTCTGTGAGCCTCCGAAAGAGAAGATCATTCTA
R I S W A V F C E P P K E K I I L
1217 AAGCCACTGCCAGAGACAGTAACTGAGGCTGAGCCACCGCTCTTTCCACC
||||||||||||||||||||||||||||||||||||||||||||||||||
997 AAGCCACTGCCAGAGACAGTAACTGAGGCTGAGCCACCGCTCTTTCCACC
K P L P E T V T E A E P P L F P P
1267 CCGTACCTTTGCTCAGCATATGGCACACAAGCTGTTCAGGAAGAGCCAGG
||||||||||||||||||||||||||||||||||||||||||||||||||
1047 CCGTACCTTTGCTCAGCATATGGCACACAAGCTGTTCAGGAAGAGCCAGG
R T F A Q H M A H K L F R K S Q
1317 AAGCTATTGATGACTCGAAAAAGGTTCAGCCACAGGAACAAAATAATGCT
||||||||||||||||||||||||||||||| ||||||||||||||||||
1097 AAGCTATTGATGACTCGAAAAAGGTTCAGCCGCAGGAACAAAATAATGCT
E A I D D S K K V Q P Q E Q N N A
1367 GAAACTGATATTCCTCAGCCAGAAGAACAACAAAAAACCGTAGAAAGTAA
||||||||||||||||||||| |||||||||||||| | |||||||||
1147 GAAACTGATATTCCTCAGCCAACCGAACAACAAAAAACTGAAGAAAGTAA
E T D I P Q P T E Q Q K T E E S N
1417 ACCTCAGAAAATTGAAATATTAAAGCCTGGAGAAGAGGCATCTACTTCTC
|||||||||||| |||||||||||||||||||||||||||||| |||||
1197 TCCTCAGAAAATTTAAATATTAAAGCCTGGAGAAGAGGCATCTAGTTCTC
P Q K I *
1467 CATAATTTGAAATTTCTCAGCTGCTGGAACAGAATAACTATCCTCTAAAA
||||||||||||||||||||||||||||||||||||||||||||||||||
1247 CATAATTTGAAATTTCTCAGCTGCTGGAACAGAATAACTATCCTCTAAAA
1517 GTAGATATCCGAATCCTTCTATCAAGAGTTGATTTGTCACAGGCTTCAGA
|||||||||||||||||||||||||||||| ||||||||||| |||||||
1297 GTAGATATCCGAATCCTTCTATCAAGAGTTAATTTGTCACAGACTTCAGA
1567 CATTACTATCTCAGTTGCCACATGTTTGAAATATGTTAAATAACC-TTGT
||||||||||||||||||| ||||||||||||||||||||||||| ||||
1347 CATTACTATCTCAGTTGCCTCATGTTTGAAATATGTTAAATAACCTTTGT
1616 TGCAATATATTCAAGTATTGGTTTCTATAATAAATTATGAGAATATCCGT
||||||||||||| ||||||||||| ||||||||||||||
1397 TGCAATATATTCATGTATTGGTTTCCATAATAAATTATGA
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Multiple Alignments
Block 1
lcl|Carrot: 136 to 691
gb|AF184273.1|: 1 to 556
gb|AF184274.1|: 1 to 556
tcacctcaag<-flank
136 CTTCAATTTCAGAAATAAACACAGAGCACATACTAAATCACGATGGTCGC
1 .....T................................TG.......G..
1 .....T......................G..........G.......G..
186 GACTACCTTAGAATCTCCAAGAGTAGAGACCCTGGCTGGGAGTGGCATTC
51 A.......................T.........................
51 A.................G...............................
236 AGCTAATCCCGAAAGAATACGTGAGGCCGAAAGATGAACTTGTCAGCATC
101 ..........A.................T............A........
101 ..........C.............................CA........
286 ACCAACATTTTCGAGGAGGAAAAGAGTGATGAAGGCCCTCAGGTGCCCAC
151 ..................................................
151 ..................................................
336 AGTCGACATAGCTGATATTCTGTCTGATGACAGAGCTGTCAGGGAGAAAT
201 .....................T.....G....A......T..........
201 ................................A...G..T..........
386 GCTATGAAAGAATTAAGGATGCTGCCGTGGACTGGGGAGTCATGCACCTT
251 .............C...........T.....A.................A
251 .............C...................................C
436 GTTAACCACGGGATCTCAAATGAGCTCATGGATCGTGTTAGAGTGGCTGG
301 ..............T.................C.................
301 ....................C.............................
486 ACAGGCGTTTTTTGCTGAACCAATTGGCGAGAAGGAGAAGTATGCAAATG
351 ..................................................
351 .....................G.....T......................
536 ATCCGGGCACTGGAATGATTCAAGGGTATGGAAGCAAGCTAGCCAACAAT
401 ....A.....C.......................T...............
401 ....A.....C..T........G....................A......
586 GCCAGCGGCCAGCTTGAGTGGGAAGACTATTTCTTCCACCTTGTTTACCC
451 ..T...............................................
451 ..T...............................................
636 CGAAGAGAAAGCTGATTTGTCTATTTGGCCTAAGAAACCACAGGACTACA
501 ...G....................C..........G..............
501 T..G........C......................G..............
686 TGTAAG
551 .TCC..
551 .TCC..
flank->tcgccacaaa
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Block 2
lcl|Carrot: 777 to 1655
gb|AF184274.1|: 557 to 1436
gb|AF184273.1|: 557 to 1426
tgcagtccgg<-flank
777 CAACAAGGGAGTACGCGAAGGAGTTAAGAGGCCTCGCGACAAAGTTACTA
557 ..................................................
557 ..................................A..............G
827 TCTGCATTATCTATAGGACTGGGACTTGAAGAAGGAAGGCTAGAAAAAGA
607 ............T.C...................................
607 ............T.C...................................
877 AGTTGGCGGAATGGAAGAGCTAATACTCCAGATGAAGATCAATTACTACC
657 ..................................................
657 ......T..............G........A...................
927 CGAAGTGTCCTCAACCTGAACTGGCTCTCGGTGTTGAAGCTCACACTGAT
707 ............................T.....................
707 .C..........................T..A..................
977 GTGAGTGCACTCAGTTTCATACTCCATAATATGGTTCCTGGGCTACAACT
757 ...................................G.....T........
757 ...............................C...G..............
1027 CTTCTATGGAGGCAAGTGGGTGACCGCTAAATGTGTTCCAGACTCTATTA
807 G..T.......................A......................
807 ..................................................
1077 TAGTACACATTGGGGACACACTTGAAATTTTAAGCAATGGCAAGTATAAA
857 ................T.....A...........................
857 ..................................................
1127 AGCATTCTTCACAGGGGACTTGTGAACAAGGAGAAAGTTAGAATTTCGTG
907 ................................A.................
907 ................................A.................
1177 GGCTGTTTTCTGTGAGCCTCCTAAAGAGAAGATTATTCTAAAGCCACTGC
957 .....................G...........C................
957 .....................G.......................G....
1227 CAGAGACAGTAACTGAGGCTGAGCCACCGCTCTTTCCACCCCGTACCTTT
1007 ..................................................
1007 .......G..........................................
1277 GCTCAGCATATGGCACACAAGCTGTTCAGGAAGAGCCAGGAAGCTATTGA
1057 ..................................................
1057 ..................................................
1327 TGACTCGAAAAAGGTTCAGCCACAGGAACAAAATAATGCTGAAACTGATA
1107 .....................G............................
1107 ..............................G...................
1377 TTCCTCAGCCAGAAGAACAACAAAAAACCGTAGAAAGTAAACCTCAGAAA
1157 ...........ACC..............T.A.........T.........
1157 .........................G....A.........T.........
1427 ATTGAAATATTAAAGCCTGGAGAAGAGGCATCTACTTCTCCATAATTTGA
1207 ...T..............................G...............
1207 ..................................G...............
1477 AATTTCTCAGCTGCTGGAACAGAATAACTATCCTCTAAAAGTAGATATCC
1257 ..................................................
1257 ...............A..................................
1527 GAATCCTTCTATCAAGAGTTGATTTGTCACAGGCTTCAGACATTACTATC
1307 ....................A...........A.................
1307 ....................A.......................G.....
1577 TCAGTTGCCACATGTTTGAAATATGTTAAATAACC-TTGTTGCAATATAT
1357 .........T.........................T..............
1357 .T.......T.........................T..............
1626 TCAAGTATTGGTTTCTATAATAAATTATGA
1407 ...T...........C..............
1407 ...T...........C....----------
flank->gaatatccgt
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