Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Tuesday, 15-Jul-2014 15:47:31 CDT

Installation notes for wgsim version 0.3.1-r13 - Oct. 17, 2011

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Prerequisites

None

Installation

  1. $ cd /programinstallers/
  2. $ git clone https://github.com/lh3/wgsim.git
  3. $ cd wgsim
  4. $ gcc -g -O2 -Wall -o wgsim wgsim.c -lz -lm
  5. $ cp -puv wgsim wgsim_eval.pl /usr/local/bin/
    ‘wgsim’ -> ‘/usr/local/bin/wgsim’
    ‘wgsim_eval.pl’ -> ‘/usr/local/bin/wgsim_eval.pl’
  6. Copy README to local web page
    $ cp -puv README ../bioinformatics/programs/wgsim/README.txt
  7. Cleanup
    $ cd ..
  8. $ rm wgsim -rf