This page was last updated on Monday, 23-Nov-2015 16:11:47 CST
Installation notes for TransDecoder version 2.0.1
Home Page
Prerequisites
CD-HIT, however version 4.6.1 of CD-HIT is included with TransDecoder
Installation
- $ ver="2.0.1"
- $ cd /programinstallers/
- $ wget -N https://github.com/TransDecoder/TransDecoder/archive/$ver.tar.gz
- $ mv $ver.tar.gz TransDecoder-$ver.tar.gz
- $ cd /usr/local/bin/
- $ tar -zxvf /programinstallers/TransDecoder-$ver.tar.gz
- Version-independent symlink
$ ln -s TransDecoder-$ver TransDecoder
- $ cd TransDecoder
- To compile the included version of CD-HIT
$ make
- To add to default PATH
$ sudo nano /etc/profile
…
PATH="$PATH:/usr/local/bin/TransDecoder"
…