Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

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Installation notes for tabix version 0.2.4 (10 April, 2011)

Home Page

Prerequisites

svn
$ sudo apt-get install subversion

Installation

  1. $ cd /programinstallers/
  2. $ svn checkout https://github.com/samtools/tabix
  3. $ cd tabix/trunk
  4. $ make
  5. Manual installation
    $ cp -puv tabix tabix.py bgzip /usr/local/bin
  6. There are also Perl and Python versions, but I did not use these
  7. Cleanup
    $ cd ../..
  8. $ rm tabix -rf