This page was last updated on Monday, 25-Aug-2014 17:51:51 CDT

Installation notes for SSAHA2 version v2.5.5 Released November 11th 2011

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Prerequisites

None

Installation

1. $ ver="v2.5.5"
2. $ cd /programinstallers/
3. $ wget -N ftp://ftp.sanger.ac.uk/pub/resources/software/ssaha2/ssaha2_${ver}_x86_64.tgz
4. $ tar -zxvf ssaha2_${ver}_x86_64.tgz
   

   ssaha2_v2.5.5_x86_64/
   ssaha2_v2.5.5_x86_64/ssaha2
   ssaha2_v2.5.5_x86_64/ssaha2Build
   ssaha2_v2.5.5_x86_64/ssahaSNP
   ssaha2_v2.5.5_x86_64/README

5. $ cp -puv ssaha2_${ver}_x86_64/{ssaha2,ssaha2Build,ssahaSNP} /usr/local/bin/
6. Copy README for local web page
   $ cp -puv ssaha2_${ver}_x86_64/README web/programs/ssaha2/README.txt
7. Cleanup
   $ rm ssaha2_${ver}_x86_64/ -rf