Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Thursday, 18-Dec-2014 15:45:46 CST

Installation notes for SOAPsnp Release 1.03, 05-25-2009

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Prerequisites

boost
Info in Breakdancer install notes

Installation

  1. $ ver="v1.03"
  2. $ cd /programinstallers/
  3. $ wget -N http://soap.genomics.org.cn/down/SOAPsnp-$ver.tar.gz
  4. $ tar -zxvf SOAPsnp-$ver.tar.gz
  5. $ cd SOAPsnpZ
  6. $ make all
  7. Manual installation
    $ cp -puv soapsnp /usr/local/bin/SOAP/
  8. Copy readme file for web page
    $ cp -puv readme /U:/simonlabweb/bioinformatics/programs/soap/soapsnp.readme.txt
  9. Cleanup
    $ cd ..
  10. $ rm SOAPsnpZ -rf