Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Friday, 11-Nov-2016 11:45:50 CST

Installation notes for SNP-o-matic version revision 14

Home Page

Prerequisites

svn
$ sudo apt-get install subversion

Installation

  1. $ cd /programinstallers/
  2. $ svn checkout svn://svn.code.sf.net/p/snpomatic/code/ snpomatic-code
  3. $ cd snpomatic-code
  4. $ make
  5. Manual install
    $ cp -puv findknownsnps /usr/local/bin/
  6. Documentation for web page
    $ mkdir /U:/simonlabweb/bioinformatics/programs/snpomatic
  7. $ cp -puv doc/Manual.doc /U:/simonlabweb/bioinformatics/programs/snpomatic/
  8. Cleanup
    $ cd ..
  9. $ rm snpomatic-code -rf