This page was last updated on Wednesday, 22-Jan-2014 16:11:25 CST

Installation notes for PRINSEQ lite version 0.20.4 and PRINSEQ graphs version 0.6

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Prerequisites

• Perl modules for prinseq-lite
  • Getopt::Long
  • Pod::Usage
  • File::Temp qw(tempfile)
  • Fcntl qw(:flock SEEK_END)
  • Digest::MD5 qw(md5_hex)
  • Cwd
  • List::Util qw(sum min max)
  $ sudo cpan Getopt::Long Pod::Usage File::Temp Fcntl Digest::MD5 Cwd List::Util
• Cairo development package
  Fedora $ sudo yum install cairo-devel
  Ubuntu $ sudo apt-get install libcairo2-dev
• Perl modules for prinseq-graphs
  • Getopt::Long
  • Pod::Usage
  • File::Temp qw(tempfile)
  • Fcntl qw(:flock SEEK_END)
  • Cwd
  • JSON
  • Cairo
  • Statistics::PCA
  • MIME::Base64
  $ sudo cpan Getopt::Long Pod::Usage File::Temp Fcntl Cwd JSON Cairo Statistics::PCA MIME::Base64

Installation

1. $ cd /programinstallers/
2. $ wget -N http://downloads.sourceforge.net/project/prinseq/standalone/prinseq-lite-0.20.4.tar.gz
3. $ tar -zxvf prinseq-lite-0.20.4.tar.gz
4. Install
   $ cp -puv prinseq-lite-0.20.4/prinseq-lite.pl /usr/local/bin/prinseq-lite && chmod +x /usr/local/bin/prinseq-lite
5. $ cp -puv prinseq-lite-0.20.4/prinseq-graphs.pl /usr/local/bin/prinseq-graphs && chmod +x /usr/local/bin/prinseq-graphs
6. For web page documentation
   $ mkdir web/prinseq
7. $ cp -puv prinseq-lite-0.20.4/README web/prinseq/README.txt
8. $ cp -puvr prinseq-lite-0.20.4/example web/prinseq
9. Cleanup
   $ rm prinseq-lite-0.20.4 -rf