Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Saturday, 12-Nov-2016 11:07:48 CST

Installation notes for MView version 1.56 - Oct 20, 2013

Home Page

Prerequisites

Perl

Installation

  1. $ ver="1.56"
  2. $ cd /programinstallers/
  3. $ wget -N http://downloads.sourceforge.net/project/bio-mview/bio-mview/mview-$ver/mview-$ver.tar.bz2
  4. $ cd /usr/local/bin
  5. $ tar -jxvf /programinstallers/mview-$ver.tar.bz2
  6. To install, the source code must be modified to specify library location
    $ nano mview-$ver/bin/mview
  7. Change line
    use lib '/home/brown/HOME/work/MView_$ver/lib';
    to
    use lib '/usr/local/bin/mview-1.56/lib';
  8. To put in the default PATH, move the program
    $ mv mview-$ver/bin/mview . && rmdir mview-$ver/bin
  9. Move documentation to local web page, and don't need _sources directory
    $ mkdir /U:/simonlabweb/bioinformatics/programs/mview
  10. $ rm mview-$ver/html/_sources -rf
  11. $ cp -puvr mview-$ver/html/* /programinstallers/web/mview/
  12. $ rm mview-$ver/html -rf
  13. Test
    $ mview -help