Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Friday, 23-Jan-2015 09:06:37 CST

Installation notes for MCL (Markov Clustering algorithm) version 14-137

Home Page

Prerequisites

None

Installation

  1. $ ver="14-137"
  2. $ cd /programinstallers/
  3. $ wget -N http://micans.org/mcl/src/mcl-$ver.tar.gz
  4. $ tar -zxvf mcl-$ver.tar.gz
  5. $ cd mcl-$ver
  6. $ ./configure --prefix=/usr/local/bin/mcl
  7. $ make
  8. $ make install
  9. This can be added to the default PATH
    $ sudo nano /etc/profile

    PATH="$PATH:/usr/local/bin/mcl/bin"
  10. Cleanup
    $ cd ..
  11. $ rm mcl-$ver -rf