This page was last updated on Wednesday, 26-Aug-2015 08:59:01 CDT

Installation notes for Haploview version 4.2

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Prerequisites

Java

Installation

1. $ cd /usr/local/bin/
2. $ wget -N https://www.broadinstitute.org/ftp/pub/mpg/haploview/Haploview.jar
3. Create a launcher
   $ sudo nano /usr/share/applications/Bioinformatics/Haploview.desktop

   #!/usr/bin/env xdg-open
   
   [Desktop Entry]
   Version=1.0
   Type=Application
   Terminal=false
   Exec=/usr/bin/java -jar /usr/local/bin/Haploview.jar
   Name=Haploview
   Comment=Haploview
   Icon=               
   Categories=Bioinformatics

4. Create a command line launcher
   $ nano /usr/local/bin/haploview

   #!/bin/bash
   java -jar /usr/local/bin/Haploview.jar -nogui $@

5. $ chmod +x /usr/local/bin/haploview