Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Wednesday, 19-Mar-2014 11:15:11 CDT

Installation notes for GFF2PS version 0.98d - May 27, 2003

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Prerequisites

Installation

  1. $ cd /programinstallers/
  2. $ wget -N ftp://genome.imim.es/pub/gff_tools/gff2ps/gff2ps_v0.98d.gz
  3. $ wget -N http://genome.imim.es/software/gfftools/gff2ps_docs/manual/MANUAL_GFF2PS_v0.96.ps.gz
  4. $ gunzip gff2ps_v0.98d.gz
  5. $ gunzip MANUAL_GFF2PS_v0.96.ps.gz
  6. Put manual on web page
    $ ps2pdf MANUAL_GFF2PS_v0.96.ps MANUAL_GFF2PS_v0.96.pdf
  7. $ mkdir /U:/simonlabweb/bioinformatics/programs/gff2ps
  8. $ mv MANUAL_GFF2PS_v0.96.pdf /U:/simonlabweb/bioinformatics/programs/gff2ps/
  9. Configure by modifying source code
    $ nano gff2ps_v0.98d

    GAWK="/usr/local/bin/gawk";GAWK="/bin/gawk";
  10. Install
    $ cd /usr/local/bin
  11. $ mv /programinstallers/gff2ps_v0.98d .
  12. Make a version-independent symlink
    $ ln -s gff2ps_v0.98d gff2ps
  13. Cleanup
    $ rm MANUAL_GFF2PS_v0.96.ps