Carrot root and DNA VCRU Bioinformatics USDA ARS Vegetable Crops Research Unit

This page was last updated on Wednesday, 22-Jan-2014 16:11:25 CST

Installation notes for gce version 1.0.0

Publication: Estimation of genomic characteristics by analyzing k-mer frequency in de novo genome projects
Local copy

Prerequisites

None

Installation

  1. $ cd /programinstallers/
  2. $ wget -r -N ftp://ftp.genomics.org.cn/pub/gce
  3. $ mv ftp.genomics.org.cn/pub/gce/gce-1.0.0.tar.gz .
  4. $ rm ftp.genomics.org.cn/ -rf
  5. $ tar -zxvf gce-1.0.0.tar.gz
  6. In addition to source, there is a compiled version, just install that
    $ mv gce-1.0.0/gce /usr/local/bin/
  7. For documentation
    $ mv gce-1.0.0/README.txt gce-1.0.0/Howto.txt /U:/simonlabweb/bioinformatics/programs/gce/