This page was last updated on Wednesday, 22-Jan-2014 16:11:25 CST

Installation notes for DiffSplice version 0.1.1

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Prerequisites

None

Installation

1. $ cd /programinstallers/
2. $ wget -N http://protocols.netlab.uky.edu/~yin/download/diffsplice/diffsplice_0.1.1.tgz
3. $ tar -zxvf diffsplice_0.1.1.tgz
4. $ cd diffsplice_0.1.1
5. $ make
6. $ mkdir /usr/local/bin/diffsplice
7. $ cp -puv diffsplice /usr/local/bin/diffsplice/
8. $ cp -puv bin/* /usr/local/bin/diffsplice/
   `bin/diff_asm_analysis' -> `/usr/local/bin/diffsplice/diff_asm_analysis'
   `bin/diff_expr_analysis' -> `/usr/local/bin/diffsplice/diff_expr_analysis'
   `bin/fragment' -> `/usr/local/bin/diffsplice/fragment'
   `bin/sepSAM' -> `/usr/local/bin/diffsplice/sepSAM'
   `bin/tree' -> `/usr/local/bin/diffsplice/tree'
9. $ sudo nano /etc/profile
   ...
   PATH="$PATH:/usr/local/bin/diffsplice"
   ...
   
10. $ cd ..
11. $ rm diffsplice_0.1.1 -rf