This page was last updated on Friday, 01-Aug-2014 08:39:41 CDT

Installation notes for Bowtie1 version 1.0.0

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Prerequisites

None

Installation

1. $ ver="1.0.0"
2. $ cd /programinstallers/
3. $ wget -N http://sourceforge.net/projects/bowtie-bio/files/bowtie/$ver/bowtie-$ver-linux-x86_64.zip
4. $ cd /usr/local/bin
5. $ unzip /programinstallers/bowtie-$ver-linux-x86_64.zip
6. If upgrading, delete old symlink
   $ rm bowtie1
7. Create version-independent symlink
   $ ln -s bowtie-$ver bowtie1
8. Unless upgrading, add version-independent symlink to path for all users
   $ sudo nano /etc/profile
   ...
   PATH="$PATH:/usr/local/bin/bowtie1"
   ...