Usage: sga subgraph [OPTION] ... ID ASQGFILE Extract the subgraph around the sequence with ID from an asqg file. -v, --verbose display verbose output --help display this help and exit -o, --out=FILE write the subgraph to FILE (default: subgraph.asqg.gz) -s, --size=N the size of the subgraph to extract, all vertices that are at most N hops away from the root will be included (default: 5) Report bugs to js18@sanger.ac.uk